Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	T11b high vs low squamous_GSEA_Ranked
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	0.3431489
Normalized Enrichment Score (NES)	1.9329103
Nominal p-value	0.0
FDR q-value	0.008607455
FWER p-Value	0.059

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Plat	29	3.372	0.0500	Yes
2	Il1a	44	2.812	0.0942	Yes
3	Hmox1	55	2.684	0.1372	Yes
4	Il1b	129	1.912	0.1515	Yes
5	Emp1	133	1.901	0.1830	Yes
6	Rnasel	179	1.692	0.2006	Yes
7	Cdkn1a	192	1.625	0.2251	Yes
8	Anxa1	290	1.344	0.2239	Yes
9	Gna15	326	1.197	0.2355	Yes
10	Irf1	372	1.111	0.2432	Yes
11	Atf3	373	1.107	0.2619	Yes
12	Lgals3	377	1.096	0.2798	Yes
13	Timp2	462	0.955	0.2752	Yes
14	Gadd45a	473	0.944	0.2887	Yes
15	Tnf	495	0.907	0.2989	Yes
16	Hspb1	500	0.898	0.3131	Yes
17	Gadd45b	522	0.873	0.3227	Yes
18	Cd44	562	0.834	0.3272	Yes
19	Birc3	607	0.758	0.3291	Yes
20	Cflar	686	0.680	0.3213	Yes
21	Timp3	754	0.625	0.3153	Yes
22	Pdgfrb	764	0.616	0.3235	Yes
23	Tgfb2	800	0.593	0.3249	Yes
24	Sat1	817	0.584	0.3308	Yes
25	Bcl2l1	878	0.552	0.3253	Yes
26	Casp8	920	0.520	0.3239	Yes
27	Pmaip1	935	0.514	0.3292	Yes
28	Rela	943	0.509	0.3361	Yes
29	Mcl1	950	0.505	0.3431	Yes
30	Madd	1256	-0.548	0.2768	No
31	Erbb3	1362	-0.568	0.2604	No
32	Wee1	1388	-0.572	0.2639	No
33	Pak1	1534	-0.600	0.2382	No
34	Nedd9	1559	-0.605	0.2425	No
35	Mgmt	1660	-0.622	0.2282	No
36	Erbb2	1855	-0.662	0.1914	No
37	Bmf	2085	-0.712	0.1467	No
38	Etf1	2182	-0.735	0.1353	No
39	Fas	2311	-0.764	0.1166	No
40	Tnfsf10	2592	-0.845	0.0615	No
41	F2r	2690	-0.872	0.0522	No
42	Sod1	2691	-0.874	0.0670	No
43	Fdxr	2703	-0.876	0.0791	No
44	Txnip	2924	-0.947	0.0407	No
45	Tap1	3068	-1.004	0.0222	No
46	Il18	3078	-1.010	0.0371	No
47	Gstm2	3116	-1.026	0.0454	No
48	Dnajc3	3125	-1.028	0.0608	No
49	Psen1	3136	-1.034	0.0759	No
50	Casp4	3233	-1.084	0.0704	No
51	Ccnd1	3303	-1.112	0.0722	No
52	Rock1	3378	-1.149	0.0733	No
53	Clu	3405	-1.162	0.0866	No
54	Pdcd4	3488	-1.204	0.0867	No
55	Isg20	3663	-1.348	0.0664	No
56	Ereg	4031	-2.297	0.0144	No